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Amber to MMTK

This converter allows the conversion from a NetCDF trajectory generated with Amber 9 or 10 [26] to a MMTK NetCDF trajectory (unfortunately, both NetCDF files do not follow the same convention). For version of Amber lower than 9, Amber provides some tools for the conversion to Amber NetCDF trajectories. Pressing the Amber NetCDF to MMTK menubutton, the dialog shown in figure 4.4 will pop up.
Figure 4.4: The Amber to MMTK converter dialog.
\includegraphics[width=10cm]{Figures/amber_converter.eps}

To perform the conversion, the following input fields must be filled:


next up previous contents
Next: CHARMM/X-PLOR to MMTK Up: Trajectory conversion Previous: Trajectory conversion   Contents
pellegrini eric 2009-10-06